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Revert "Development" This reverts commit 3326677c6af2b3519863e866c3c35658a9a49570. git-svn-id: ...

OpenMx trunk - Wed, 06/04/2014 - 05:37
In openmx/openmx.git:master Revert "Development" This reverts commit 3326677c6af2b3519863e866c3c35658a9a49570. git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3524 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Development git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3523 df83fd30-4cca-4c36-ab9d-e...

OpenMx trunk - Wed, 06/04/2014 - 05:36
In openmx/openmx.git:master Development git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3523 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Reinstate R_CheckUserInterrupt git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3522 df83fd...

OpenMx trunk - Wed, 06/04/2014 - 05:36
In openmx/openmx.git:master Reinstate R_CheckUserInterrupt git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3522 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Fail if a model has an expectation, no fitfunction, and no custom compute plan git-svn-id: http:...

OpenMx trunk - Sun, 06/01/2014 - 00:32
In openmx/openmx.git:master Fail if a model has an expectation, no fitfunction, and no custom compute plan git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3521 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Reduce tolerance for SEM SEs git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3520 df83fd30...

OpenMx trunk - Sat, 05/31/2014 - 23:46
In openmx/openmx.git:master Reduce tolerance for SEM SEs git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3520 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Use type Eigen::DenseIndex instead of guessing int or long git-svn-id: http://openmx.psyc.virgin...

OpenMx trunk - Sat, 05/31/2014 - 21:17
In openmx/openmx.git:master Use type Eigen::DenseIndex instead of guessing int or long git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3519 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Update for 2.0beta1 git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3518 df83fd30-4cca-4c3...

OpenMx trunk - Sat, 05/31/2014 - 02:54
In openmx/openmx.git:master Update for 2.0beta1 git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3518 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Require ItemParam rownames to match latent factor names git-svn-id: http://openmx.psyc.virginia....

OpenMx trunk - Fri, 05/30/2014 - 21:04
In openmx/openmx.git:master Require ItemParam rownames to match latent factor names git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3517 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Auto-detect two-tier covariance structure; remove explicit design matrix git-svn-id: http://open...

OpenMx trunk - Fri, 05/30/2014 - 21:04
In openmx/openmx.git:master Auto-detect two-tier covariance structure; remove explicit design matrix git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3516 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Switch libifa-rpf from C to C++ git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3515 df83f...

OpenMx trunk - Fri, 05/30/2014 - 21:03
In openmx/openmx.git:master Switch libifa-rpf from C to C++ git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3515 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Split BA81 quadrature code into a separate file git-svn-id: http://openmx.psyc.virginia.edu/svn/...

OpenMx trunk - Fri, 05/30/2014 - 21:03
In openmx/openmx.git:master Split BA81 quadrature code into a separate file git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3514 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Don't need long width integer counters git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@351...

OpenMx trunk - Fri, 05/30/2014 - 21:03
In openmx/openmx.git:master Don't need long width integer counters git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3513 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Re-factor quadrature setup git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3512 df83fd30-4...

OpenMx trunk - Fri, 05/30/2014 - 21:03
In openmx/openmx.git:master Re-factor quadrature setup git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3512 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Omit E-step related math for likelihood CIs For models/passing/fm-example-2-2.R, before: 23.12u...

OpenMx trunk - Fri, 05/30/2014 - 21:03
In openmx/openmx.git:master Omit E-step related math for likelihood CIs For models/passing/fm-example-2-2.R, before: 23.12user 0.10system 0:04.46elapsed 520%CPU (0avgtext+0avgdata 113388maxresident)k 0inputs+0outputs (0major+44592minor)pagefaults 0swaps After: 17.48user 0.10system 0:03.78elapsed 465%CPU (0avgtext+0avgdata 116028maxresident)k 0inputs+0outputs (0major+45061minor)pagefaults 0swaps git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3511 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Repair debug logging git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3510 df83fd30-4cca-4c...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Repair debug logging git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3510 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Set negative eigenvalues to a small positive number instead of zero git-svn-id: http://openmx.ps...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Set negative eigenvalues to a small positive number instead of zero git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3509 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Accept both NA and "" to disable EM acceleration git-svn-id: http://openmx.psyc.virginia.edu/svn...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Accept both NA and "" to disable EM acceleration git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3508 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Reimplement omxData storage to facilitate dynamic data git-svn-id: http://openmx.psyc.virginia.e...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Reimplement omxData storage to facilitate dynamic data git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3507 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Always recompute patternLik This is always necessary in the fast path. The only possible gain is...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Always recompute patternLik This is always necessary in the fast path. The only possible gain is in slow paths, but the dependency tracking is too complex to be worth it. git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3506 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1

Document how to remove a Rd file from roxygen2 control git-svn-id: http://openmx.psyc.virginia.e...

OpenMx trunk - Fri, 05/30/2014 - 21:02
In openmx/openmx.git:master Document how to remove a Rd file from roxygen2 control git-svn-id: http://openmx.psyc.virginia.edu/svn/trunk@3505 df83fd30-4cca-4c36-ab9d-e8b5583ccbd1
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